U.S. Department of Energy, Office of Science
Poplar Genome Based Research for Carbon Sequestration in Terrestrial Ecosystems

Program Publications

2008

Busov VB, Brunner AM, Strauss SH (2008) Genes for control of plant stature and form. New Phytologist 177:589-607

Hancock JE, Bradley KL Giardina CP, Pregitzer KS (2008) The influence of soil type and altered lignin biosynthesis on the growth and above and belowground biomass allocation of Populus tremuloides. Plant and Soil DOI 10.1007/s11104-008-9624-2

2007

Bradley KL, Hancock JE, Giardina CP, Pregitzer KS (2007) Soil microbial community responses to altered lignin biosynthesis in Populus tremuloides vary among three distinct soils. Plant and Soil 294:185-201

Etherington E, Gandhi H, Busov V, Meilan R, Ma C, Kosola K, Strauss SH (2007) Dwarfism genes for modifying the stature of woody plants: a case study in poplar. Landscape Plant News 18:3-6

Groover AT (2007) Will genomics guide a greener forest biotech? Trends in Plant Science 12:234-238

Hancock JE, Loya WM, Giardina CP, Li L, Chiang VL, Pregitzer KS (2007) Plant growth, biomass partitioning and soil carbon formation in response to altered lignin biosynthesis in Populus tremuloides. New Phytologist 173:732-742

2006

Arias RS, Filichkin SA, Strauss SH (2006) Divide and conquer: development and cell cycle genes in plant transformation. TRENDS in Biotechnology 24:267-273

Busov V, Meilan R, Pearce DW, Rood SB, Ma C, Tschaplinski TJ, Strauss SH (2006) Transgenic modification of gai or rgl1 causes dwarfing and alters gibberellins, root growth, and metabolite profiles in Populus. Planta 224:288-299

Filichkin SA, Meilan R, Busov VB, Ma C, Brunner AM, Strauss SH (2006) Alcohol-inducible gene expression in transgenic Populus. Plant Cell Reports 25:660-667

Filichkin SA, Wu Q, Busov V, Meilan R, Lanz-Garcia C, Groover A, Goldfarb B, Ma C, Dharmawardhana P, Brunner A, Strauss SH (2006) Enhancer trapping in woody plants: isolation of the ET304 gene encoding a putative AT-hook motif transcription factor and characterization of the expression patterns conferred by its promoter in transgenic Populus and Arabidopsis. Plant Science 171:206-216

Groover A, Robischon M (2006) Developmental mechanisms regulating secondary growth in woody plants. Current Opinion in Plant Biology 9:55-58

Rae AM, Ferris R, Tallis MJ, Taylor G (2006) Elucidating genomic regions determining enhanced leaf growth and delayed senescence in elevated CO2. Plant, Cell and Environment 29:1730-1741

Tsai C-J, Harding SA, Tschaplinski TJ, Lindroth RL, Yuan Y (2006) Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus. New Phytologist 172:47-62

Tsai C-J, El Kayal W, Harding SA (2006) Populus, the new model system for investigating phenylpropanoid complexity. International Journal of Applied Science and Engineering 4:221-233

2005

Cseke LJ, Cseke SB, Ravinder N, Taylor LC, Shankar A, Sen B, Thakur R, Karnosky DF, Podila GK (2005) SEP-class genes in Populus tremuloides and their likely role in reproductive survival of poplar trees. Gene 358:1-16

Gupta P, Duplessis S, White H, Karnosky DF, Martin F, Podila GK (2005) Gene expression patterns of trembling aspen trees following long-term exposure to interacting elevated CO2 and tropospheric O3. New Phytologist 167:129-142

Taylor G, Street NR, Tricker PJ, Sjodin A, Graham L, Skogstrom O, Calfapietra C, Scarascia-Mugnozza G, Jansson S (2005) The transcriptome of Populus in elevated CO2. New Phytologist 167:143-154

Wullschleger SD, Yin TM, DiFazio SP, Tschaplinski TJ, Gunter LE, Davis MF, Tuskan GA (2005) Phenotypic variation in growth and biomass distribution for two advanced-generation pedigrees of hybrid poplar. Canadian Journal of Forest Research 35:1779-1789

2004

Ma C, Strauss SH, Meilan R (2004) Agrobacterium-mediated transformation of the genome-sequenced poplar clone, Nisqually-1 (Populus trichocarpa). Plant Molecular Biology Reporter 22:311a-311i


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